A Novel SARS-CoV-2 Viral Sequence Bioinformatic Pipeline Has Found Genetic Evidence That the Viral 3′ Untranslated Region (UTR) Is Evolving and Generating Increased Viral Diversity

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Farkas et al.2021.A Novel SARS-CoV-2 Viral Sequence Bioinformatic Pipeline Has Found Genetic Evidence That the Viral 3′ Untranslated Region (UTR) Is Evolving and Generating Increased Viral Diversity.pdf (4.85 MB)

Date

2021-06-21

Document type

journal article

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Investigación
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Authors

Farkas, Carlos, Mella, Andy, Turgeon, Maxime, Haigh, Jody J.

Publisher

FRONTIERS MEDIA SA

URI

https://repositorio.udla.cl/handle/udla/1077

DOI

https://doi.org/10.3389/fmicb.2021.665041

Keywords

3cpsdummy ' UTR, SARS-CoV-2 variants, nucleotide diversity (pi), Tajima's D-statistic, viral evolution, VCF

Citation

Frontiers in Microbiology, 12, 665041. https://doi.org/10.3389/fmicb.2021.665041

Abstract

An unprecedented amount of SARS-CoV-2 sequencing has been performed, however, novel bioinformatic tools to cope with and process these large datasets is needed. Here, we have devised a bioinformatic p...

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Creative Commons Attribution 4.0 International
Except where otherwised noted, this item's license is described as Creative Commons Attribution 4.0 International
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