Calcium-Alginate-Chitosan Nanoparticle as a Potential Solution for Pesticide Removal, a Computational Approach

dc.contributor.affiliationUniversidad de Las Americas - Chile
dc.contributor.affiliationComplutense University of Madrid
dc.contributor.affiliationUniversidad Autonoma de Chile
dc.contributor.affiliationUniversidad de Talca
dc.contributor.affiliationEscuela Superior Politecnica del Litoral
dc.contributor.affiliationUniversidad Catolica del Maule
dc.contributor.authorYáñez, Osvaldo
dc.contributor.authorAlegría-Arcos, Melissa
dc.contributor.authorSuardiaz, Reynier
dc.contributor.authorMorales-Quintana, Luis
dc.contributor.authorCastro, Ricardo I.
dc.contributor.authorPalma-Olate, Jonathan
dc.contributor.authorGalarza, Christian
dc.contributor.authorCatagua-Gonzalez, Angel
dc.contributor.authorRojas-Perez, Víctor
dc.contributor.authorUrra, Gabriela
dc.contributor.authorHernández-Rodríguez, Erix W.
dc.contributor.authorBustos, Daniel
dc.date.accessioned2024-09-03T19:17:39Z
dc.date.available2024-09-03T19:17:39Z
dc.date.issued2023-07-12
dc.description.abstractPesticides have a significant negative impact on the environment, non-target organisms, and human health. To address these issues, sustainable pest management practices and government regulations are necessary. However, biotechnology can provide additional solutions, such as the use of polyelectrolyte complexes to encapsulate and remove pesticides from water sources. We introduce a computational methodology to evaluate the capture capabilities of Calcium-Alginate-Chitosan (CAC) nanoparticles for a broad range of pesticides. By employing ensemble-docking and molecular dynamics simulations, we investigate the intermolecular interactions and absorption/adsorption characteristics between the CAC nanoparticles and selected pesticides. Our findings reveal that charged pesticide molecules exhibit more than double capture rates compared to neutral counterparts, owing to their stronger affinity for the CAC nanoparticles. Non-covalent interactions, such as van der Waals forces, π-π stacking, and hydrogen bonds, are identified as key factors which stabilized the capture and physisorption of pesticides. Density profile analysis confirms the localization of pesticides adsorbed onto the surface or absorbed into the polymer matrix, depending on their chemical nature. The mobility and diffusion behavior of captured compounds within the nanoparticle matrix is assessed using mean square displacement and diffusion coefficients. Compounds with high capture levels exhibit limited mobility, indicative of effective absorption and adsorption. Intermolecular interaction analysis highlights the significance of hydrogen bonds and electrostatic interactions in the pesticide-polymer association. Notably, two promising candidates, an antibiotic derived from tetracycline and a rodenticide, demonstrate a strong affinity for CAC nanoparticles. This computational methodology offers a reliable and efficient screening approach for identifying effective pesticide capture agents, contributing to the development of eco-friendly strategies for pesticide removal.
dc.description.sponsorshipANID FONDECYT [11220444]; This research was funded by ANID FONDECYT Initiation Project No. 11220444 (D.B.).
dc.format.mimetypeapplication/pdf
dc.identifier.citationPolymers, 15(14), 3020. https://doi.org/10.3390/polym15143020
dc.identifier.doihttps://doi.org/10.3390/polym15143020
dc.identifier.folio11220444
dc.identifier.folio11230033
dc.identifier.folio3170107
dc.identifier.issn2073-4360
dc.identifier.orcidhttps://orcid.org/0000-0001-8993-9353
dc.identifier.orcidhttps://orcid.org/0000-0002-1035-9020
dc.identifier.orcidhttps://orcid.org/0000-0002-7194-1989
dc.identifier.orcidhttps://orcid.org/0000-0002-4818-6006
dc.identifier.orcidhttps://orcid.org/0000-0002-2136-2305
dc.identifier.orcidhttps://orcid.org/0009-0006-3871-0261
dc.identifier.orcidhttps://orcid.org/0009-0000-1245-9351
dc.identifier.orcidhttps://orcid.org/0000-0002-9372-9153
dc.identifier.orcidhttps://orcid.org/0000-0002-9231-7552
dc.identifier.orcidhttps://orcid.org/0000-0002-3924-1907
dc.identifier.pmid37514411
dc.identifier.researcheridAAA-3766-2020
dc.identifier.researcheridB-2962-2008
dc.identifier.researcheridAAE-6799-2020
dc.identifier.researcheridI-4299-2018
dc.identifier.researcheridGPC-4659-2022
dc.identifier.researcheridADW-5898-2022
dc.identifier.rorhttps://ror.org/0166e9x11
dc.identifier.rorhttps://ror.org/02p0gd045
dc.identifier.rorhttps://ror.org/010r9dy59
dc.identifier.rorhttps://ror.org/01s4gpq44
dc.identifier.rorhttps://ror.org/04qenc566
dc.identifier.rorhttps://ror.org/04vdpck27
dc.identifier.scopusauthorid55794064800
dc.identifier.scopusauthorid55928612000
dc.identifier.scopusauthorid14521613800
dc.identifier.scopusauthorid36731136500
dc.identifier.scopusauthorid56261735700
dc.identifier.scopusauthorid57200960817
dc.identifier.scopusauthorid57147632900
dc.identifier.scopusauthorid57209538097
dc.identifier.scopusauthorid58511998700
dc.identifier.scopusauthorid58513693600
dc.identifier.scopusauthorid36100064500
dc.identifier.scopusauthorid57076160800
dc.identifier.urihttps://repositorio.udla.cl/handle/udla/1340
dc.language.isoeng
dc.publisherMDPI AG
dc.relation.fundingANID FONDECYT, (11220444, 11230033, 3170107)
dc.relation.fundingRoyal Society of Chemistry, RSC, (PID2020-113147GA-I00, R20-6912, PID2021-122839NB-I00, MCIN/AEI/10.13039/501100011033, R21-6448709305)
dc.relation.fundingRoyal Society of Chemistry, RSC
dc.relation.fundingANID FONDECYT [11220444]
dc.relation.isindexedbyWeb of Science
dc.relation.issn2073-4360
dc.rightsCreative Commons Attribution 4.0 International
dc.rights.accessrightsinfo:eu-repo/semantics/openAccess
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.sourcePOLYMERS
dc.source.urihttps://doi.org/10.3390/polym15143020
dc.subjectvirtual screening
dc.subjectensemble-docking
dc.subjectmolecular dynamics simulation
dc.subjectalginate-chitosan
dc.subjectnanoparticle
dc.subjectpolyelectrolyte matrix
dc.subjectpesticide adsorption
dc.subject.lcshNanopartículas
dc.subject.oecd11 Ciencias Naturales
dc.subject.oecd21.4 Ciencias Químicas
dc.subject.oecd31.4.4 Polímeros
dc.titleCalcium-Alginate-Chitosan Nanoparticle as a Potential Solution for Pesticide Removal, a Computational Approach
dc.title.alternativeCalcium-Alginate-Chitosan Nanoparticle as a Potential Solution for Pesticide Removal, a Computational Approach.
dc.typejournal article
dc.type.coarhttp://purl.org/coar/resource_type/c_6501
dc.type.driverinfo:eu-repo/semantics/article
oaire.citation.issue14
oaire.citation.titlePOLYMERS
oaire.citation.volume15
oaire.fundingReference.awardNumber11220444
oaire.fundingReference.awardNumber11230033
oaire.fundingReference.awardNumber3170107
oaire.fundingReference.funderNameAgencia Nacional de Investigación y Desarrollo (ANID)
udla.curacion.controljmvg
udla.oecd.area1 Ciencias Naturales
udla.oecd.discipline1.4.4 Polímeros
udla.oecd.subarea1.4 Ciencias Químicas

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