Epidemiological characteristics of Omicron and Delta SARS-CoV-2 variant infection in Santiago, Chile

dc.contributor.affiliationCentro de Biotecnología Acuícola, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile
dc.contributor.affiliationLaboratorio Biología Celular y Molecular, Instituto de Investigación en Ciencias Odontológicas, Facultad de Odontología, Universidad de Chile, Santiago, Chile
dc.contributor.affiliationHospital de Urgencia Asistencia Pública (HUAP), Santiago, Chile
dc.contributor.affiliationDepartamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile
dc.contributor.affiliationNúcleo de Investigación Aplicada en Ciencias Veterinarias y Agronómicas, Facultad de Medicina Veterinaria y Agronomía, Universidad de Las Américas, Santiago, Chile
dc.contributor.authorMella-Torres, Andrea
dc.contributor.authorEscobar, Alejandro
dc.contributor.authorBarrera-Avalos, Carlos
dc.contributor.authorVargas-Salas, Sergio
dc.contributor.authorPirazzoli, Michelle
dc.contributor.authorGonzalez, Ulises
dc.contributor.authorValdes, Daniel
dc.contributor.authorRojas, Patricio
dc.contributor.authorLuraschi, Roberto
dc.contributor.authorVallejos-Vidal, Eva
dc.contributor.authorImarai, Mónica
dc.contributor.authorSandino, Ana María
dc.contributor.authorReyes-López, Felipe E.
dc.contributor.authorVera, Rodrigo
dc.contributor.authorAcuña-Castillo, Claudio
dc.date.accessioned2024-09-03T19:19:14Z
dc.date.available2024-09-03T19:19:14Z
dc.date.issued2022-10-21
dc.description.abstractThe variant of concern (VOC) SARS-CoV-2 Omicron (B.1.1529) has been described as a highly contagious variant but less virulent than the current variant being monitored (VBM) Delta (B.1.617.2), causing fewer cases of hospitalizations, symptomatology, and deaths associated with COVID-19 disease. Although the epidemiological comparison of both variants has been previously reported in other countries, no report indicates their behavior and severity of infection in Chile. In this work, we report for the first time the effect of the Omicron and Delta variants in a cohort of 588 patients from the Hospital de Urgencia Asistencia pública (HUAP), a high-complexity health center in Santiago, Chile. This report is framed at the beginning of Chile's third wave of the COVID-19 pandemic, with a marked increase in the Omicron variant and a decrease in the circulating Delta variant. Our results indicated a similar proportion of patients with a complete vaccination schedule for both variants. However, the Delta variant was associated with a higher prevalence of hospitalization and more significant symptomatology associated with respiratory distress. On the other hand, our data suggest that vaccination is less effective in preventing infection by the Omicron variant. This antecedent, with a low severity but high contagiousness, suggests that the Omicron variant could even collapse the primary health care service due to the high demand for health care.
dc.description.sponsorshipThe Laboratory of Virology had the support from the COVID-19 diagnosis in the University laboratories network (Ministry of Sciences, Ministry of Health, Government of Chile) for diagnosis tasks. The authors also thank to the rapid assignment of resources for research projects on the Coronavirus pandemic (COVID-19) (project number COVID1038; Agencia Nacional de Investigación y Desarrollo de Chile (ANID), Government of Chile), Fondecyt regular project numbers 1201664 (MI) and 1211841 (FER-L), and Fondecyt iniciacion project number 11221308 (EV-V) (ANID, Government of Chile). We also thank to the DICYT-USACH project number 021943AC (CA-C). The funders had no role in study design, data collection, and analysis, decision to publish, or preparation of the manuscript.
dc.format.mimetypeapplication/pdf
dc.identifier.citationFrontiers in Public Health, 10, 984433. https://doi.org/10.3389/fpubh.2022.984433
dc.identifier.doihttps://doi.org/10.3389/fpubh.2022.984433
dc.identifier.folio11221308
dc.identifier.folio1201664
dc.identifier.folio1211841
dc.identifier.issn2296-2565
dc.identifier.orcidhttps://orcid.org/0000-0002-7207-619X
dc.identifier.orcidhttps://orcid.org/0000-0002-1587-4179
dc.identifier.orcidhttps://orcid.org/0000-0001-6160-9563
dc.identifier.orcidhttps://orcid.org/0000-0002-9369-2856
dc.identifier.orcidhttps://orcid.org/0000-0001-5611-4320
dc.identifier.orcidhttps://orcid.org/0000-0002-3091-2700
dc.identifier.orcidhttps://orcid.org/0000-0001-8767-9180
dc.identifier.orcidhttps://orcid.org/0000-0002-3862-3743
dc.identifier.orcidhttps://orcid.org/0000-0002-5001-457X
dc.identifier.orcidhttps://orcid.org/0000-0001-9032-7194
dc.identifier.orcidhttps://orcid.org/0000-0003-3607-6077
dc.identifier.pmid36339233
dc.identifier.rorhttps://ror.org/02ma57s91
dc.identifier.rorhttps://ror.org/047gc3g35
dc.identifier.rorhttps://ror.org/035zr6437
dc.identifier.rorhttps://ror.org/0166e9x11
dc.identifier.scopusauthorid57217385219
dc.identifier.scopusauthorid7101621507
dc.identifier.scopusauthorid57195985435
dc.identifier.scopusauthorid57195325093
dc.identifier.scopusauthorid57956173500
dc.identifier.scopusauthorid57192175858
dc.identifier.scopusauthorid6602680747
dc.identifier.scopusauthorid7005445744
dc.identifier.scopusauthorid55854290500
dc.identifier.scopusauthorid46061320500
dc.identifier.scopusauthorid57190291825
dc.identifier.scopusauthorid6603906080
dc.identifier.scopusauthorid36773500800
dc.identifier.scopusauthorid57564168700
dc.identifier.scopusauthorid6603281718
dc.identifier.urihttps://repositorio.udla.cl/handle/udla/1436
dc.language.isoeng
dc.publisherFrontiers Media SA
dc.relation.fundingMinistry of Health, MOH
dc.relation.fundingDepartamento de Investigaciones Científicas y Tecnológicas, Universidad de Santiago de Chile, DICYT, (021943AC)
dc.relation.fundingDepartamento de Investigaciones Científicas y Tecnológicas, Universidad de Santiago de Chile, DICYT
dc.relation.fundingAgencia Nacional de Investigación y Desarrollo, ANID, (11221308, 1201664, 1211841, COVID1038)
dc.relation.fundingAgencia Nacional de Investigación y Desarrollo, ANID
dc.relation.isindexedbyScopus
dc.relation.issn2296-2565
dc.rightsCreative Commons Attribution 4.0 International
dc.rights.accessrightsinfo:eu-repo/semantics/openAccess
dc.rights.urihttps://creativecommons.org/licenses/by/4.0/
dc.sourceFrontiers in Public Health
dc.source.urihttps://doi.org/10.3389/fpubh.2022.984433
dc.subjectChile
dc.subjectdelta
dc.subjectepidemiology
dc.subjectOmicron
dc.subjectpandemic
dc.subjectSARS-CoV-2
dc.subjectvaccination
dc.subject.lcshDelta - Chile
dc.subject.lcshEpidemiología
dc.subject.lcshOmicron
dc.subject.lcshVacunación
dc.subject.oecd13 Ciencias Médicas y de la Salud
dc.subject.oecd23.3 Ciencias de la Salud
dc.titleEpidemiological characteristics of Omicron and Delta SARS-CoV-2 variant infection in Santiago, Chile
dc.title.alternativeEpidemiological characteristics of Omicron and Delta SARS-CoV-2 variant infection in Santiago, Chile.
dc.typejournal article
dc.type.coarhttp://purl.org/coar/resource_type/c_6501
dc.type.driverinfo:eu-repo/semantics/article
dc.udla.catalogadorCBM
oaire.citation.titleFrontiers in Public Health
oaire.citation.volume10
oaire.fundingReference.awardNumber11221308
oaire.fundingReference.awardNumber1201664
oaire.fundingReference.awardNumber1211841
oaire.fundingReference.funderNameAgencia Nacional de Investigación y Desarrollo (ANID)
udla.curacion.controljmvg
udla.odsODS 3: Salud y bienestar
udla.oecd.area3 Ciencias Médicas y de la Salud
udla.oecd.subarea3.3 Ciencias de la Salud

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