Epidemiological characteristics of Omicron and Delta SARS-CoV-2 variant infection in Santiago, Chile
| dc.contributor.affiliation | Centro de Biotecnología Acuícola, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile | |
| dc.contributor.affiliation | Laboratorio Biología Celular y Molecular, Instituto de Investigación en Ciencias Odontológicas, Facultad de Odontología, Universidad de Chile, Santiago, Chile | |
| dc.contributor.affiliation | Hospital de Urgencia Asistencia Pública (HUAP), Santiago, Chile | |
| dc.contributor.affiliation | Departamento de Biología, Facultad de Química y Biología, Universidad de Santiago de Chile, Santiago, Chile | |
| dc.contributor.affiliation | Núcleo de Investigación Aplicada en Ciencias Veterinarias y Agronómicas, Facultad de Medicina Veterinaria y Agronomía, Universidad de Las Américas, Santiago, Chile | |
| dc.contributor.author | Mella-Torres, Andrea | |
| dc.contributor.author | Escobar, Alejandro | |
| dc.contributor.author | Barrera-Avalos, Carlos | |
| dc.contributor.author | Vargas-Salas, Sergio | |
| dc.contributor.author | Pirazzoli, Michelle | |
| dc.contributor.author | Gonzalez, Ulises | |
| dc.contributor.author | Valdes, Daniel | |
| dc.contributor.author | Rojas, Patricio | |
| dc.contributor.author | Luraschi, Roberto | |
| dc.contributor.author | Vallejos-Vidal, Eva | |
| dc.contributor.author | Imarai, Mónica | |
| dc.contributor.author | Sandino, Ana María | |
| dc.contributor.author | Reyes-López, Felipe E. | |
| dc.contributor.author | Vera, Rodrigo | |
| dc.contributor.author | Acuña-Castillo, Claudio | |
| dc.date.accessioned | 2024-09-03T19:19:14Z | |
| dc.date.available | 2024-09-03T19:19:14Z | |
| dc.date.issued | 2022-10-21 | |
| dc.description.abstract | The variant of concern (VOC) SARS-CoV-2 Omicron (B.1.1529) has been described as a highly contagious variant but less virulent than the current variant being monitored (VBM) Delta (B.1.617.2), causing fewer cases of hospitalizations, symptomatology, and deaths associated with COVID-19 disease. Although the epidemiological comparison of both variants has been previously reported in other countries, no report indicates their behavior and severity of infection in Chile. In this work, we report for the first time the effect of the Omicron and Delta variants in a cohort of 588 patients from the Hospital de Urgencia Asistencia pública (HUAP), a high-complexity health center in Santiago, Chile. This report is framed at the beginning of Chile's third wave of the COVID-19 pandemic, with a marked increase in the Omicron variant and a decrease in the circulating Delta variant. Our results indicated a similar proportion of patients with a complete vaccination schedule for both variants. However, the Delta variant was associated with a higher prevalence of hospitalization and more significant symptomatology associated with respiratory distress. On the other hand, our data suggest that vaccination is less effective in preventing infection by the Omicron variant. This antecedent, with a low severity but high contagiousness, suggests that the Omicron variant could even collapse the primary health care service due to the high demand for health care. | |
| dc.description.sponsorship | The Laboratory of Virology had the support from the COVID-19 diagnosis in the University laboratories network (Ministry of Sciences, Ministry of Health, Government of Chile) for diagnosis tasks. The authors also thank to the rapid assignment of resources for research projects on the Coronavirus pandemic (COVID-19) (project number COVID1038; Agencia Nacional de Investigación y Desarrollo de Chile (ANID), Government of Chile), Fondecyt regular project numbers 1201664 (MI) and 1211841 (FER-L), and Fondecyt iniciacion project number 11221308 (EV-V) (ANID, Government of Chile). We also thank to the DICYT-USACH project number 021943AC (CA-C). The funders had no role in study design, data collection, and analysis, decision to publish, or preparation of the manuscript. | |
| dc.format.mimetype | application/pdf | |
| dc.identifier.citation | Frontiers in Public Health, 10, 984433. https://doi.org/10.3389/fpubh.2022.984433 | |
| dc.identifier.doi | https://doi.org/10.3389/fpubh.2022.984433 | |
| dc.identifier.folio | 11221308 | |
| dc.identifier.folio | 1201664 | |
| dc.identifier.folio | 1211841 | |
| dc.identifier.issn | 2296-2565 | |
| dc.identifier.orcid | https://orcid.org/0000-0002-7207-619X | |
| dc.identifier.orcid | https://orcid.org/0000-0002-1587-4179 | |
| dc.identifier.orcid | https://orcid.org/0000-0001-6160-9563 | |
| dc.identifier.orcid | https://orcid.org/0000-0002-9369-2856 | |
| dc.identifier.orcid | https://orcid.org/0000-0001-5611-4320 | |
| dc.identifier.orcid | https://orcid.org/0000-0002-3091-2700 | |
| dc.identifier.orcid | https://orcid.org/0000-0001-8767-9180 | |
| dc.identifier.orcid | https://orcid.org/0000-0002-3862-3743 | |
| dc.identifier.orcid | https://orcid.org/0000-0002-5001-457X | |
| dc.identifier.orcid | https://orcid.org/0000-0001-9032-7194 | |
| dc.identifier.orcid | https://orcid.org/0000-0003-3607-6077 | |
| dc.identifier.pmid | 36339233 | |
| dc.identifier.ror | https://ror.org/02ma57s91 | |
| dc.identifier.ror | https://ror.org/047gc3g35 | |
| dc.identifier.ror | https://ror.org/035zr6437 | |
| dc.identifier.ror | https://ror.org/0166e9x11 | |
| dc.identifier.scopusauthorid | 57217385219 | |
| dc.identifier.scopusauthorid | 7101621507 | |
| dc.identifier.scopusauthorid | 57195985435 | |
| dc.identifier.scopusauthorid | 57195325093 | |
| dc.identifier.scopusauthorid | 57956173500 | |
| dc.identifier.scopusauthorid | 57192175858 | |
| dc.identifier.scopusauthorid | 6602680747 | |
| dc.identifier.scopusauthorid | 7005445744 | |
| dc.identifier.scopusauthorid | 55854290500 | |
| dc.identifier.scopusauthorid | 46061320500 | |
| dc.identifier.scopusauthorid | 57190291825 | |
| dc.identifier.scopusauthorid | 6603906080 | |
| dc.identifier.scopusauthorid | 36773500800 | |
| dc.identifier.scopusauthorid | 57564168700 | |
| dc.identifier.scopusauthorid | 6603281718 | |
| dc.identifier.uri | https://repositorio.udla.cl/handle/udla/1436 | |
| dc.language.iso | eng | |
| dc.publisher | Frontiers Media SA | |
| dc.relation.funding | Ministry of Health, MOH | |
| dc.relation.funding | Departamento de Investigaciones Científicas y Tecnológicas, Universidad de Santiago de Chile, DICYT, (021943AC) | |
| dc.relation.funding | Departamento de Investigaciones Científicas y Tecnológicas, Universidad de Santiago de Chile, DICYT | |
| dc.relation.funding | Agencia Nacional de Investigación y Desarrollo, ANID, (11221308, 1201664, 1211841, COVID1038) | |
| dc.relation.funding | Agencia Nacional de Investigación y Desarrollo, ANID | |
| dc.relation.isindexedby | Scopus | |
| dc.relation.issn | 2296-2565 | |
| dc.rights | Creative Commons Attribution 4.0 International | |
| dc.rights.accessrights | info:eu-repo/semantics/openAccess | |
| dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
| dc.source | Frontiers in Public Health | |
| dc.source.uri | https://doi.org/10.3389/fpubh.2022.984433 | |
| dc.subject | Chile | |
| dc.subject | delta | |
| dc.subject | epidemiology | |
| dc.subject | Omicron | |
| dc.subject | pandemic | |
| dc.subject | SARS-CoV-2 | |
| dc.subject | vaccination | |
| dc.subject.lcsh | Delta - Chile | |
| dc.subject.lcsh | Epidemiología | |
| dc.subject.lcsh | Omicron | |
| dc.subject.lcsh | Vacunación | |
| dc.subject.oecd1 | 3 Ciencias Médicas y de la Salud | |
| dc.subject.oecd2 | 3.3 Ciencias de la Salud | |
| dc.title | Epidemiological characteristics of Omicron and Delta SARS-CoV-2 variant infection in Santiago, Chile | |
| dc.title.alternative | Epidemiological characteristics of Omicron and Delta SARS-CoV-2 variant infection in Santiago, Chile. | |
| dc.type | journal article | |
| dc.type.coar | http://purl.org/coar/resource_type/c_6501 | |
| dc.type.driver | info:eu-repo/semantics/article | |
| dc.udla.catalogador | CBM | |
| oaire.citation.title | Frontiers in Public Health | |
| oaire.citation.volume | 10 | |
| oaire.fundingReference.awardNumber | 11221308 | |
| oaire.fundingReference.awardNumber | 1201664 | |
| oaire.fundingReference.awardNumber | 1211841 | |
| oaire.fundingReference.funderName | Agencia Nacional de Investigación y Desarrollo (ANID) | |
| udla.curacion.control | jmvg | |
| udla.ods | ODS 3: Salud y bienestar | |
| udla.oecd.area | 3 Ciencias Médicas y de la Salud | |
| udla.oecd.subarea | 3.3 Ciencias de la Salud |
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