Smartphone screen testing, a novel pre-diagnostic method to identify sars-cov-2 infectious individuals
| dc.contributor.affiliation | University of London | |
| dc.contributor.affiliation | University College London | |
| dc.contributor.affiliation | Clinica Davila | |
| dc.contributor.affiliation | Universidad de Chile | |
| dc.contributor.affiliation | Universidad de Santiago de Chile | |
| dc.contributor.affiliation | Autonomous University of Barcelona | |
| dc.contributor.affiliation | Universidad de Las Americas - Chile | |
| dc.contributor.affiliation | Great Ormond Street Hospital for Children NHS Foundation Trust | |
| dc.contributor.author | Young, Rodrigo M. | |
| dc.contributor.author | Solis, Camila J. | |
| dc.contributor.author | Barriga-Fehrman, Andres | |
| dc.contributor.author | Abogabir, Carlos | |
| dc.contributor.author | Thadani, Alvaro R. | |
| dc.contributor.author | Labarca, Mariana | |
| dc.contributor.author | Bustamante, Eva | |
| dc.contributor.author | Tapia, Cecilia V | |
| dc.contributor.author | Sarda, Antonia G. | |
| dc.contributor.author | Sepulveda, Francisca | |
| dc.contributor.author | Pozas, Nadia | |
| dc.contributor.author | Cerpa, Leslie C. | |
| dc.contributor.author | Lavanderos, Maria A. | |
| dc.contributor.author | Varela, Nelson M. | |
| dc.contributor.author | Santibanez, Alvaro | |
| dc.contributor.author | Sandino, Ana M. | |
| dc.contributor.author | Reyes-López, Felipe | |
| dc.contributor.author | Dixon, Garth | |
| dc.contributor.author | Quinones, Luis A. | |
| dc.date.accessioned | 2022-05-26T17:13:34Z | |
| dc.date.available | 2022-05-26T17:13:34Z | |
| dc.date.issued | 2021-06-22 | |
| dc.description.abstract | The COVID-19 pandemic will likely take years to control globally, and constant epidemic surveillance will be required to limit the spread of SARS-CoV-2, especially considering the emergence of new variants that could hamper the effect of vaccination efforts. We developed a simple and robust – Phone Screen Testing ( PoST ) – method to detect SARS-CoV-2-positive individuals by RT-PCR testing of smartphone screen swab samples. We show that 81.3–100% of individuals with high-viral-load SARS-CoV-2 nasopharyngeal-positive samples also test positive for PoST , suggesting this method is effective in identifying COVID-19 contagious individuals. Furthermore, we successfully identified polymorphisms associated with SARS-CoV-2 Alpha, Beta, and Gamma variants, in SARS-CoV-2-positive PoST samples. Overall, we report that PoST is a new non-invasive, cost-effective, and easy-to-implement smartphone-based smart alternative for SARS-CoV-2 testing, which could help to contain COVID-19 outbreaks and identification of variants of concern in the years to come. | |
| dc.description.sponsorship | Moorfields Eye Hospital NHS Foundation Trust [001155, GR001210]; Agencia Nacional de Investigacion e Innovacion [ANID-Covid0789, ANID-Covid1038]; FONDECYT [1211841]; Moorfields Eye Hospital NHS Foundation Trust 001155 Rodrigo M Young Moorfields Eye Hospital NHS Foundation Trust GR001210 Rodrigo M Young Agencia Nacional de Investigacio ' n e Innovacio ' n ANID-Covid0789 Luis A Quin~ ones Agencia Nacional de Investigacio ' n e Innovacio ' n ANID-Covid1038 Ana M Sandino Felipe Reyes-Lopez FONDECYT 1211841 Felipe Reyes-Lopez The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication. | |
| dc.format.mimetype | application/pdf | |
| dc.identifier.citation | eLife, 10, e70333. https://doi.org/10.7554/elife.70333 | |
| dc.identifier.doi | https://doi.org/10.7554/elife.70333 | |
| dc.identifier.folio | 1211841 | |
| dc.identifier.issn | 2050-084X | |
| dc.identifier.orcid | https://orcid.org/0000-0001-5765-197X | |
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| dc.identifier.orcid | https://orcid.org/0000-0002-5229-3007 | |
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| dc.identifier.orcid | https://orcid.org/0000-0002-7967-5320 | |
| dc.identifier.pmid | 34155970 | |
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| dc.identifier.researcherid | HPF-0615-2023 | |
| dc.identifier.researcherid | AAI-9717-2021 | |
| dc.identifier.ror | https://ror.org/02jx3x895 | |
| dc.identifier.ror | https://ror.org/04gyvnw24 | |
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| dc.identifier.scopusauthorid | 8575942300 | |
| dc.identifier.scopusauthorid | 57224998128 | |
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| dc.identifier.uri | https://repositorio.udla.cl/handle/udla/1079 | |
| dc.language.iso | eng | |
| dc.publisher | eLife Sciences Publications, Ltd | |
| dc.relation.funding | Fondo Nacional de Desarrollo Científico y Tecnológico, FONDECYT, (1211841) | |
| dc.relation.funding | Moorfields Eye Charity Career Development Award, (ANID-Covid0789) | |
| dc.relation.funding | Moorfields Eye Hospital NHS Foundation Trust [001155, GR001210] | |
| dc.relation.funding | Agencia Nacional de Investigacion e Innovacion [ANID-Covid0789, ANID-Covid1038] | |
| dc.relation.funding | FONDECYT [1211841] | |
| dc.relation.isindexedby | Web of Science | |
| dc.relation.issn | 2050-084X | |
| dc.rights | Creative Commons Attribution 4.0 International | |
| dc.rights.accessrights | info:eu-repo/semantics/openAccess | |
| dc.rights.uri | https://creativecommons.org/licenses/by/4.0/ | |
| dc.source | ELIFE | |
| dc.source.uri | https://doi.org/10.7554/eLife.70333 | |
| dc.subject | COVID-19 | |
| dc.subject | COVID-19 Nucleic Acid Testing | |
| dc.subject | Humans | |
| dc.subject | Pandemics | |
| dc.subject | SARS-CoV-2 | |
| dc.subject | Smartphone | |
| dc.subject | Article | |
| dc.subject | cohort analysis | |
| dc.subject | controlled study | |
| dc.subject | coronavirus disease 2019 | |
| dc.subject | COVID-19 testing | |
| dc.subject | cycle threshold value | |
| dc.subject | diagnostic test accuracy study | |
| dc.subject | disease transmission | |
| dc.subject | double blind procedure | |
| dc.subject | gene amplification | |
| dc.subject | gene mutation | |
| dc.subject | genetic association | |
| dc.subject | genetic variability | |
| dc.subject | human | |
| dc.subject | nasopharyngeal swab | |
| dc.subject | pandemic | |
| dc.subject | pilot study | |
| dc.subject | real time polymerase chain reaction | |
| dc.subject | RNA extraction | |
| dc.subject | sensitivity and specificity | |
| dc.subject | Severe acute respiratory syndrome coronavirus 2 | |
| dc.subject | single nucleotide polymorphism | |
| dc.subject | smartphone screen testing | |
| dc.subject | validation study | |
| dc.subject | virus detection | |
| dc.subject | virus infectivity | |
| dc.subject | virus load | |
| dc.subject | diagnosis | |
| dc.subject | epidemiology | |
| dc.subject | genetics | |
| dc.subject | pandemic | |
| dc.subject | smartphone | |
| dc.subject.lcsh | COVID-19 (Disease) | |
| dc.subject.lcsh | Microbiology. | |
| dc.subject.oecd1 | 1 Ciencias Naturales | |
| dc.subject.oecd2 | 1.6 Ciencias Biológicas | |
| dc.title | Smartphone screen testing, a novel pre-diagnostic method to identify sars-cov-2 infectious individuals | |
| dc.title.alternative | Smartphone screen testing, a novel pre-diagnostic method to identify SARS-CoV-2 infectious individuals. | |
| dc.type | journal article | |
| dc.type.coar | http://purl.org/coar/resource_type/c_6501 | |
| dc.type.driver | info:eu-repo/semantics/article | |
| dc.udla.catalogador | CBM | |
| oaire.citation.title | ELIFE | |
| oaire.citation.volume | 10 | |
| oaire.fundingReference.awardNumber | 1211841 | |
| oaire.fundingReference.funderName | Agencia Nacional de Investigación y Desarrollo (ANID) | |
| udla.curacion.control | jmvg | |
| udla.oecd.area | 1 Ciencias Naturales | |
| udla.oecd.subarea | 1.6 Ciencias Biológicas |
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